 |
| Predicted structure (top-ranked model) of EphA7 with ATP docked into the top-ranked binding pocket. |
|
Threading (top 3 templates)
| Rank |
PDB-ID |
Sequence identity |
Z-score |
Confidence |
| 1 | 1ad5A | 45.4% | 26.53 | high |
| 2 | 1m14A | 36.1% | 17.57 | high |
| 3 | 1jpaA | 84.1% | 17.30 | high |
Structure modeling (top 3 models)
| Model number |
C-score |
Confidence |
| 1 | 2.68 | high |
| 2 | -4.01 | low |
| 3 | -5.23 | low |
Binding pockets (top 3 pockets for the top-ranked model)
Pocket number
|
Pocket center
|
Binding residues |
| 1 | x = 9.239
y = 3.465
z = 4.572 | I7, G8, A9, G10, E11, F12, V15, A31, K33, E50, V63, I79, E80, F81, M82, E83, G85, A86, A89, A128, R130, N131, L133, S143, D144 |
| 2 | x = 0.817
y = 7.240
z = -17.410 | H59, P60, N61, A112, R115, Y116, V255 |
| 3 | x = 1.642
y = -3.755
z = 8.838 | A9, G10, E11, F12, D46, A86, D88, D126, A128, A129, R130, N131, D144, G146, L147, T160, K165, I166, P167, V168, R169, W170, T171, E196, R203, W206 |
Molecular function (top 3 pockets)
Pocket number
|
Gene Ontology terms
|
| 1 | GO:0016740, GO:0004672, GO:0016301, GO:0003824, GO:0016773, GO:0016772, GO:0005488, GO:0032553, GO:0000166, GO:0030554, GO:0032559, GO:0017076, GO:0032555, GO:0005524, GO:0004674, GO:0005515 |
| 2 | GO:0004674, GO:0003824, GO:0004672, GO:0016740, GO:0016301, GO:0016772, GO:0016773, GO:0005524, GO:0030554, GO:0000166, GO:0032553, GO:0032555, GO:0032559, GO:0017076, GO:0005488, GO:0005515 |
| 3 | GO:0032559, GO:0003824, GO:0004672, GO:0016740, GO:0000166, GO:0005524, GO:0017076, GO:0016301, GO:0016772, GO:0005488, GO:0032555, GO:0030554, GO:0016773, GO:0032553, GO:0004674, GO:0005515 |
Virtual screening (top 3 compounds for each method)
|